Sourdough Blueberry Muffins (Easy Same-Day & Overnight Versions)

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If you love a muffin with a high dome, a tender crumb, and a sweet berry bite, this sourdough discard recipe is for you! These sourdough blueberry muffins are bursting with blueberries, whip up quickly and have a rich, buttery flavor, all because of the brown sugar and sour cream.

The best part is that you can bake them the same day or ferment the batter overnight in the fridge and bake it the next morning. Just like my Sourdough Blueberry Buckle or Blueberry Scones, they’re a perfect weekend treat, but they work just as well for a quick weekday breakfast.

stacked two sourdough muffins

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Why You’ll Love This Recipe:

Better than bakery-style muffins: 

This recipe gives you incredibly moist muffins that beat bakery muffins every time! The crumb topping packs a crunchy punch that makes every bite worth savoring. Butter keeps the muffins tender and moist, while sourdough discard adds a tangy flavor and some health benefits regular muffins miss.

Same-day (quick) or long-fermented (overnight) recipe: 

You can whip up these muffins quickly today or let the batter chill overnight for even richer flavor. Using leftover sourdough starter or discard keeps the muffins moist and full of taste. The easy, step-by-step instructions in the recipe card below make it simple to nail this sourdough muffin recipe. Once you’ve mastered this one, try other favorites like sourdough pancakes and sourdough English muffins.

Bursting with blueberries:

I coated the blueberries in flour to keep them from sinking, so they stay evenly distributed in every muffin. Fresh berries pop in every bite and make these muffins an easy favorite for breakfast or a quick snack. The whole family gets that natural blueberry flavor every time, and honestly, what’s not to love? 

Ingredients & Substitutions

* To find precise measurements, scroll to the bottom of this post to find the recipe card*

ingredients for making sourdough blueberry muffins
  • Flour: I used all-purpose flour for this easy recipe. 
  • Sugar: The combo of white and brown sugar makes for a slightly denser muffin, but it’s incredibly moist with a slight caramel-like flavor. 
  • Sourdough discard: For sweeter recipes like these sourdough muffins, I prefer to use 1 to 2-day-old discard. You can use active sourdough starter, too, just be sure to use the same amount in grams. 
  • Sour cream: It keeps the muffins tender and super moist. You can substitute sour cream with Greek yogurt if needed. 
  • Unsalted butter: I tested this recipe with 75 g (⅓ cup) of avocado oil versus 113 grams (½ cup) of butter, and I loved the flavor and texture of the muffins made with butter more! They were more tender, less gummy, and stayed just as moist! If you are using salted butter, reduce the salt in this recipe by 1 gram (¼ teaspoon).
  • Blueberries: You can use fresh or frozen blueberries in this muffin recipe. If you are using frozen, do not thaw them first. They will likely bleed into the batter, turning it slightly purple. If you plan to long ferment this dough, I wouldn’t recommend using frozen blueberries, as they will thaw and release extra juices into the batter. You won’t get those juicy bursts of blueberry flavor unless you stick with fresh, sweet blueberries!

How to Make the Best Blueberry Muffins

The first thing to do when making this sourdough blueberry muffin recipe is to preheat the oven to 425°F. Then, line a 12-well muffin pan with muffin liners. Set aside.

mixed dry ingredients
  1. In a large bowl, whisk together the flour, baking powder, and salt until combined. Set aside.
mixed ingredients for making batter
  1. In another bowl, whisk together the sugars, melted butter, eggs, sour cream, sourdough discard, and vanilla extract until smooth. 
flour coated blueberries
  1. In a separate bowl, coat the blueberries in a little flour. This helps prevent the blueberries from sinking to the bottom of the muffins. Set aside.
blueberry muffin batter
  1. Pour the wet ingredients into the dry mixture and mix until there are just a few streaks of flour left. Add in the blueberries and fold them into the thick batter. Let the batter rest for 15 minutes.

Long Fermentation Tip

To long ferment this muffin batter, cover and place in the fridge to cold-ferment overnight, then bake as usual the following morning. 

crumble topping
  1. In the meantime, prepare the crumble topping. In a bowl, add the sugars, flour, cinnamon, and salt. Then pour in the melted butter and mix until small pea-sized pieces form. 
blueberry muffins batter placed in a muffin liner
  1. Once the batter has rested, scoop about 100 grams (5 tablespoons) into each muffin liner. The muffin tins will be full. Top with a few more blueberries and the crumble. 
baked sourdough blueberry muffins
  1. Bake for 7 minutes, then reduce the temperature to 350°F and continue to bake for 13-15 minutes or until the edges are golden brown and a toothpick inserted into the center comes out clean. 
sourdough blueberry muffins
  1. Keep the muffins in the muffin tin for 5 minutes before removing them to cool on a wire rack. Enjoy!

FAQs

Can you use frozen berries for this recipe? 

Yes, you can absolutely use frozen blueberries, just don’t thaw them first or they’ll release too much juice. Some of that juice might bleed into the batter and give it a slight purple or grayish tint, but it won’t affect the flavor. If you plan to chill the batter overnight, use fresh berries to keep the muffins from getting soggy.

Can I use avocado oil instead of butter?

You can, but expect a slightly different texture. I tested both, and while avocado oil kept the muffins moist, the butter version had a more tender crumb and richer flavor. If you’re going dairy-free, avocado oil works, but if you want the best texture, stick with butter.

How to Store:

Store cooled muffins in an airtight container at room temperature for up to 3 days or in the fridge for up to 5 days.

Rewarm in a microwave or oven as needed. 

Freezing’s simple too. Wrap each muffin tightly in plastic wrap or foil, then drop them into a freezer-safe bag or container for up to 2 months. Thaw overnight or reheat in the microwave. 

sourdough muffin on a cooling rack
stacked two sourdough muffins

Sourdough Blueberry Muffins Recipe


Yield: 12 muffins
Prep Time: 15 minutes
Cook Time: 20 minutes
Rest Time: 15 minutes
Total Time: 50 minutes

If you love a muffin with a high dome, a tender crumb, and a sweet berry bite, this sourdough discard recipe is for you! These sourdough blueberry muffins are bursting with blueberries, whip up quickly and have a rich, buttery flavor, all because of the brown sugar and sour cream.
The best part is that you can bake them the same day or ferment the batter overnight in the fridge and bake it the next morning. Just like my Sourdough Blueberry Buckle or Blueberry Scones, they’re a perfect weekend treat, but they work just as well for a quick weekday breakfast.

5 from 9 votes
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Ingredients

Sourdough Blueberry Muffins

  • 190 grams all-purpose flour about 1 1/4 cups + 1 1/2 teaspoons
  • 150 grams sugar 3/4 cup
  • 50 grams light brown sugar 1/4 cup
  • 8 grams baking powder 2 teaspoons
  • 3 grams salt 1/2 teaspoon
  • 113 grams unsalted butter, melted 1/2 cup
  • 120 grams sour cream, room temperature 1/2 cup
  • 110 grams eggs 2 large eggs
  • 120 grams sourdough discard, room temperature 1/2 cup
  • 8 grams vanilla extract 2 teaspoons
  • 300 grams fresh blueberries about 1 3/4 cups
  • 10 grams all-purpose flour heaping teaspoon

Crumble Topping

  • 50 grams sugar 1/4 cup
  • 55 grams light brown sugar 1/4 cup
  • 70 grams all-purpose flour 1/2 cup
  • 57 grams unsalted butter, melted 4 Tablespoons
  • 1 gram cinnamon 1/2 teaspoon
  • pinch of salt

Instructions

Sourdough Blueberry Muffins

  1. First, preheat the oven to 425 degrees F, then line a 12-well muffin pan with muffin liners. Set aside.
    Skip this step until the following day, if you plan to long-ferment the muffin batter.
  2. In a large bowl, whisk together flour, baking powder, and salt until combined. Set aside.
    190 grams all-purpose flour, 8 grams baking powder, 3 grams salt
  3. In another bowl, whisk together the sugars, melted butter, eggs, room temperature sour cream, room temperature sourdough discard, and vanilla extract until smooth.
    150 grams sugar, 50 grams light brown sugar, 113 grams unsalted butter, melted, 120 grams sour cream, room temperature, 110 grams eggs, 120 grams sourdough discard, room temperature, 8 grams vanilla extract
  4. Save a few of the blueberries to top the muffin batter just before baking. Then, in a separate bowl, coat the remaining blueberries with some flour. This helps the blueberries from sinking to the bottom of the muffins. Set aside.
    300 grams fresh blueberries, 10 grams all-purpose flour
  5. Pour the wet ingredients into the dry mixture and mix until there are just a few streaks of flour left. With a rubber spatula, fold the floured blueberries into the thick muffin batter. Leave the batter to rest for 15 minutes.
  6. Long Ferment: To long ferment this muffin batter, cover and place in the fridge to cold-ferment overnight, then bake as normal the following morning.

Crumble Topping

  1. In the meantime, prepare the crumble topping. To a bowl, add the sugars, flour, cinnamon, and salt and whisk until combined. Then pour in the melted butter and mix until small pea-sized pieces form.
    50 grams sugar, 55 grams light brown sugar, 70 grams all-purpose flour, 1 gram cinnamon, pinch of salt, 57 grams unsalted butter, melted

Bake

  1. Once the batter has rested, scoop about 100 grams (5 Tablespoons) into each muffin liner. The muffin tins will be full. This creates the most perfect muffin tops. Top each with a few of the saved blueberries from before and a generous amount of the crumble.
  2. Bake for 7 minutes, then reduce the temperature to 350 degrees F and continue to bake for 13-15 minutes more or until the edges are golden brown and a toothpick placed in the center comes out clean.
  3. Keep the muffins in the muffin tin for 5 minutes before removing to cool on a wire rack. Enjoy!

Notes

Ingredients & Substitutions

    • Flour: I used all-purpose flour for this easy recipe. 
    • Sugar: The combo of white and brown sugar makes for a slightly denser muffin, but it’s incredibly moist with a slight caramel-like flavor. 
    • Sourdough discard: For sweeter recipes like these sourdough muffins, I prefer to use 1 to 2-day-old discard. You can use active sourdough starter, too, just be sure to use the same amount in grams. 
    • Sour cream: It keeps the muffins tender and super moist. You can substitute sour cream with Greek yogurt if needed. 
    • Unsalted butter: I tested this recipe with 75 g (⅓ cup) of avocado oil versus 113 grams (½ cup) of butter, and I loved the flavor and texture of the muffins made with butter more! They were more tender, less gummy, and stayed just as moist! If you are using salted butter, reduce the salt in this recipe by 1 gram (¼ teaspoon).
    • Blueberries: You can use fresh or frozen blueberries in this muffin recipe. If you are using frozen, do not thaw them first. They will likely bleed into the batter, turning it slightly purple. If you plan to long ferment this dough, I wouldn’t recommend using frozen blueberries, as they will thaw and release extra juices into the batter. You won’t get those juicy bursts of blueberry flavor unless you stick with fresh, sweet blueberries!

FAQ 

Can I use avocado oil instead of butter?
Yes, you can. I tested both, and while avocado oil kept the muffins moist, the butter version had a more tender crumb and richer flavor. If you’re going dairy-free, avocado oil works, but if you want the best texture, stick with butter.
Can you use frozen blueberries?
Yes, you can absolutely use frozen blueberries, just don’t thaw them first or they’ll release too much juice. Some of that juice might bleed into the batter and give it a slight purple or grayish tint, but it won’t affect the flavor. If you plan to chill the batter overnight, use fresh berries to keep the muffins from getting soggy.

Nutrition

Serving: 1g | Calories: 340kcal | Carbohydrates: 49g | Protein: 4g | Fat: 15g | Saturated Fat: 9g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 4g | Trans Fat: 0.5g | Cholesterol: 70mg | Sodium: 189mg | Potassium: 85mg | Fiber: 1g | Sugar: 28g | Vitamin A: 480IU | Vitamin C: 3mg | Calcium: 71mg | Iron: 1mg
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5 from 9 votes

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Recipe Rating




29 Comments

  1. 5 stars
    I’ve used this multiple times without fail! I do use bread flour instead of multipurpose. Still comes out wonderful!

    1. That’s so great to hear—thank you for sharing! I love that you’ve made it multiple times successfully, and it’s really helpful to know that bread flour works well too. I’m so glad they’ve been turning out wonderfully for you each time!

  2. 5 stars
    Hello,
    I love this recipe! My family does too! So delicious! I have a strange question. I bought some mini cinnamon chips and I love a coffee cake muffin. Do you think I could substitute the mini cinnamon chips for the blueberries?

    1. That sounds like a delicious idea! Yes, you can absolutely substitute mini cinnamon chips for the blueberries. Just keep in mind the chips add extra sweetness, so the muffins may be a bit sweeter overall. Otherwise, no changes needed—I’d love to hear how they turn out!

    1. Great question. I haven’t personally tested this recipe without eggs, so I can’t guarantee the exact results. Eggs play an important role in structure and moisture for these muffins.

      If you’d like to experiment, you could try using a flax egg (1 tablespoon ground flaxseed + 2½ tablespoons water) or a store-bought egg replacer. Just keep in mind the texture may be slightly different. If you give it a try, I’d love to hear how they turn out!

    1. If you skip the crumble topping, the bake time should be about the same. Start checking around 18–22 minutes, and bake until a toothpick comes out clean from the center.

      Without the crumble, they may brown a little less on top, so just go by doneness rather than color.

  3. 5 stars
    Easily the best muffins I’ve ever had, bought, or baked. Words can not describe how good they are lol. So delicious 10/10. Highly recommend.

    1. Oh my goodness, thank you so much for this! I’m thrilled you loved the muffins that much—there’s no better compliment than “best ever baked or bought.” Thank you for taking the time to leave such a kind review and for baking one of my recipes. It means more to me than you know!

    1. Absolutely! You can make these into mini muffins—just reduce the baking time. I’d start checking around 10–12 minutes, since they’ll bake faster than regular-sized muffins, and look for a lightly golden top and a toothpick coming out clean.

  4. 5 stars
    I made these muffins for the first time on this past weekend and OMG they are so delicious! I made a couple mini muffins without the crumble just to see what no crumble tasted like and chefs kiss delish! Thank you for sharing this easy recipe! Will definitely make these again and again!

  5. 5 stars
    my go-to muffin recipe. soooo good, ive already made them 3 times, and will be making another batch tomorrow. my family eats them up. thanks mckenna!

  6. 5 stars
    Love these!!! When you ferment overnight, do you bake them cold? And if so, how much longer for baking you think?

    1. So glad you love them! Yes — if you ferment the batter overnight in the fridge, you can bake them straight from cold. They might need just a couple of extra minutes in the oven, so keep an eye on them near the end and test with a toothpick for doneness.

  7. If you want to overnight ferment and use frozen blueberries, just add the berries right before you bake!

  8. 5 stars
    These blueberry muffins are packed with blueberries and they stay moist for days! A staple in our household.